Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NclP09405 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
NclP09405 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC22.69■■□□□ 1.22
NclP09405 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC22.69■■□□□ 1.22
NclP09405 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
NclP09405 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC22.69■■□□□ 1.22
NclP09405 Gm27494-201ENSMUST00000184735 189 ntBASIC22.69■■□□□ 1.22
NclP09405 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NclP09405 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NclP09405 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NclP09405 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NclP09405 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
NclP09405 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NclP09405 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC22.68■■□□□ 1.22
NclP09405 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
NclP09405 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NclP09405 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NclP09405 Mir1895-201ENSMUST00000122615 79 ntBASIC22.68■■□□□ 1.22
NclP09405 Gm11025-201ENSMUST00000140773 466 ntBASIC22.68■■□□□ 1.22
NclP09405 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NclP09405 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NclP09405 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NclP09405 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NclP09405 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NclP09405 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NclP09405 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
NclP09405 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NclP09405 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NclP09405 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
NclP09405 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
NclP09405 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NclP09405 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
NclP09405 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC22.67■■□□□ 1.22
NclP09405 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC22.67■■□□□ 1.22
NclP09405 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC22.67■■□□□ 1.22
NclP09405 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
NclP09405 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NclP09405 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NclP09405 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
NclP09405 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NclP09405 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
NclP09405 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NclP09405 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NclP09405 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
NclP09405 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NclP09405 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
NclP09405 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC22.66■■□□□ 1.22
NclP09405 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC22.66■■□□□ 1.22
NclP09405 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC22.66■■□□□ 1.22
NclP09405 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NclP09405 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NclP09405 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
NclP09405 Prob1-201ENSMUST00000097619 3021 ntBASIC22.66■■□□□ 1.22
NclP09405 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NclP09405 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC22.66■■□□□ 1.22
NclP09405 Gm42473-201ENSMUST00000201056 2291 ntBASIC22.66■■□□□ 1.22
NclP09405 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
NclP09405 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
NclP09405 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NclP09405 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC22.65■■□□□ 1.22
NclP09405 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NclP09405 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NclP09405 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC22.65■■□□□ 1.22
NclP09405 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NclP09405 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC22.65■■□□□ 1.22
NclP09405 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NclP09405 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NclP09405 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC22.65■■□□□ 1.22
NclP09405 Gm45612-201ENSMUST00000211320 160 ntBASIC22.65■■□□□ 1.22
NclP09405 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NclP09405 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NclP09405 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NclP09405 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
NclP09405 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NclP09405 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
NclP09405 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NclP09405 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NclP09405 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
NclP09405 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
NclP09405 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NclP09405 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NclP09405 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC22.64■■□□□ 1.21
NclP09405 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NclP09405 Gm6226-201ENSMUST00000117765 1146 ntBASIC22.64■■□□□ 1.21
NclP09405 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC22.64■■□□□ 1.21
NclP09405 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NclP09405 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC22.64■■□□□ 1.21
NclP09405 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NclP09405 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC22.64■■□□□ 1.21
NclP09405 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NclP09405 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NclP09405 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
NclP09405 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.21
NclP09405 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NclP09405 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NclP09405 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NclP09405 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NclP09405 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
NclP09405 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NclP09405 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms