Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
P06344 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
P06344 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
P06344 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
P06344 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Gm15467-201ENSMUST00000120582 445 ntBASIC13.64□□□□□ -0.23
P06344 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.64□□□□□ -0.23
P06344 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.64□□□□□ -0.23
P06344 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
P06344 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.64□□□□□ -0.23
P06344 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
P06344 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
P06344 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.64□□□□□ -0.23
P06344 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06344 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06344 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06344 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
P06344 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06344 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06344 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.63□□□□□ -0.23
P06344 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06344 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.63□□□□□ -0.23
P06344 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06344 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06344 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06344 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.63□□□□□ -0.23
P06344 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.63□□□□□ -0.23
P06344 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
P06344 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06344 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.63□□□□□ -0.23
P06344 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.63□□□□□ -0.23
P06344 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.63□□□□□ -0.23
P06344 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06344 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
P06344 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06344 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06344 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
P06344 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06344 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.63□□□□□ -0.23
P06344 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
P06344 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06344 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06344 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06344 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06344 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06344 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.63□□□□□ -0.23
P06344 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06344 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06344 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
P06344 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.62□□□□□ -0.23
P06344 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.62□□□□□ -0.23
P06344 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06344 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06344 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06344 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P06344 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06344 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
P06344 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06344 Gm14722-201ENSMUST00000118943 689 ntBASIC13.62□□□□□ -0.23
P06344 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.62□□□□□ -0.23
P06344 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P06344 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.62□□□□□ -0.23
P06344 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.62□□□□□ -0.23
P06344 Gm27300-201ENSMUST00000184085 97 ntBASIC13.62□□□□□ -0.23
P06344 Gm27335-201ENSMUST00000184758 97 ntBASIC13.62□□□□□ -0.23
P06344 Gm5264-201ENSMUST00000190584 848 ntBASIC13.62□□□□□ -0.23
P06344 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.62□□□□□ -0.23
P06344 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
P06344 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06344 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P06344 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06344 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P06344 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.62□□□□□ -0.23
P06344 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06344 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06344 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms