Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops6O88545 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops6O88545 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops6O88545 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops6O88545 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC18.64■□□□□ 0.57
Cops6O88545 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops6O88545 Gm14057-201ENSMUST00000120631 482 ntBASIC18.64■□□□□ 0.57
Cops6O88545 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
Cops6O88545 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.64■□□□□ 0.57
Cops6O88545 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.64■□□□□ 0.57
Cops6O88545 Gm7063-201ENSMUST00000186840 981 ntBASIC18.64■□□□□ 0.57
Cops6O88545 Gm7774-201ENSMUST00000200064 533 ntBASIC18.64■□□□□ 0.57
Cops6O88545 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.64■□□□□ 0.57
Cops6O88545 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.64■□□□□ 0.57
Cops6O88545 AC131710.1-201ENSMUST00000228336 990 ntBASIC18.64■□□□□ 0.57
Cops6O88545 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.64■□□□□ 0.57
Cops6O88545 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cops6O88545 App-207ENSMUST00000227737 2827 ntBASIC18.64■□□□□ 0.57
Cops6O88545 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops6O88545 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cops6O88545 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cops6O88545 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops6O88545 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cops6O88545 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
Cops6O88545 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops6O88545 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
Cops6O88545 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops6O88545 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops6O88545 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cops6O88545 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cops6O88545 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cops6O88545 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cops6O88545 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cops6O88545 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cops6O88545 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cops6O88545 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC18.63■□□□□ 0.57
Cops6O88545 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cops6O88545 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cops6O88545 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cops6O88545 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cops6O88545 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cops6O88545 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC18.63■□□□□ 0.57
Cops6O88545 Gm22175-201ENSMUST00000175007 78 ntBASIC18.63■□□□□ 0.57
Cops6O88545 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cops6O88545 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cops6O88545 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cops6O88545 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cops6O88545 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cops6O88545 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cops6O88545 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cops6O88545 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cops6O88545 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops6O88545 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops6O88545 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops6O88545 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops6O88545 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cops6O88545 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cops6O88545 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cops6O88545 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops6O88545 Gm25287-201ENSMUST00000103846 110 ntBASIC18.62■□□□□ 0.57
Cops6O88545 Gm22918-201ENSMUST00000103855 110 ntBASIC18.62■□□□□ 0.57
Cops6O88545 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cops6O88545 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops6O88545 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cops6O88545 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops6O88545 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops6O88545 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops6O88545 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.62■□□□□ 0.57
Cops6O88545 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops6O88545 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cops6O88545 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops6O88545 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops6O88545 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops6O88545 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cops6O88545 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops6O88545 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops6O88545 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.62■□□□□ 0.57
Cops6O88545 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops6O88545 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cops6O88545 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cops6O88545 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cops6O88545 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cops6O88545 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cops6O88545 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cops6O88545 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cops6O88545 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cops6O88545 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cops6O88545 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cops6O88545 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cops6O88545 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cops6O88545 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.61■□□□□ 0.57
Cops6O88545 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cops6O88545 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cops6O88545 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cops6O88545 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cops6O88545 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cops6O88545 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cops6O88545 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
Cops6O88545 Gm24158-201ENSMUST00000175263 71 ntBASIC18.61■□□□□ 0.57
Cops6O88545 Gm10253-201ENSMUST00000194270 940 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms