Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.89□□□□□ -0.19
Pdlim3O70209 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.89□□□□□ -0.19
Pdlim3O70209 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm6433-201ENSMUST00000118634 875 ntBASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm14722-201ENSMUST00000118943 689 ntBASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.89□□□□□ -0.19
Pdlim3O70209 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm8825-201ENSMUST00000182565 998 ntBASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm4518-201ENSMUST00000182638 718 ntBASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.89□□□□□ -0.19
Pdlim3O70209 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.89□□□□□ -0.19
Pdlim3O70209 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pdlim3O70209 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pdlim3O70209 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.89□□□□□ -0.19
Pdlim3O70209 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
Pdlim3O70209 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Pdlim3O70209 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pdlim3O70209 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pdlim3O70209 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Gm15565-201ENSMUST00000118890 427 ntBASIC13.88□□□□□ -0.19
Pdlim3O70209 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pdlim3O70209 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.88□□□□□ -0.19
Pdlim3O70209 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.88□□□□□ -0.19
Pdlim3O70209 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.88□□□□□ -0.19
Pdlim3O70209 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Pdlim3O70209 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pdlim3O70209 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim3O70209 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Pdlim3O70209 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim3O70209 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim3O70209 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim3O70209 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Pdlim3O70209 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim3O70209 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim3O70209 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pdlim3O70209 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.87□□□□□ -0.19
Pdlim3O70209 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Pdlim3O70209 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pdlim3O70209 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim3O70209 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim3O70209 Gm10013-201ENSMUST00000106074 672 ntBASIC13.87□□□□□ -0.19
Pdlim3O70209 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Pdlim3O70209 Gm12134-201ENSMUST00000122109 520 ntBASIC13.87□□□□□ -0.19
Pdlim3O70209 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms