Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm12497-201ENSMUST00000138778 237 ntBASIC18.23■□□□□ 0.51
Smarce1O54941 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Smarce1O54941 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Smarce1O54941 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Smarce1O54941 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Smarce1O54941 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Smarce1O54941 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.23■□□□□ 0.51
Smarce1O54941 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarce1O54941 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarce1O54941 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarce1O54941 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smarce1O54941 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Smarce1O54941 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Smarce1O54941 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smarce1O54941 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smarce1O54941 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smarce1O54941 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarce1O54941 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smarce1O54941 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Smarce1O54941 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.22■□□□□ 0.51
Smarce1O54941 Gm25745-201ENSMUST00000174945 133 ntBASIC18.22■□□□□ 0.51
Smarce1O54941 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.22■□□□□ 0.51
Smarce1O54941 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.22■□□□□ 0.51
Smarce1O54941 Gm18622-201ENSMUST00000219361 595 ntBASIC18.22■□□□□ 0.51
Smarce1O54941 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.22■□□□□ 0.51
Smarce1O54941 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarce1O54941 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarce1O54941 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarce1O54941 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarce1O54941 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarce1O54941 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smarce1O54941 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarce1O54941 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarce1O54941 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarce1O54941 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Smarce1O54941 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
Smarce1O54941 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.22■□□□□ 0.51
Smarce1O54941 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarce1O54941 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smarce1O54941 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smarce1O54941 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarce1O54941 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarce1O54941 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarce1O54941 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Smarce1O54941 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Smarce1O54941 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Smarce1O54941 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.21■□□□□ 0.51
Smarce1O54941 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Smarce1O54941 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarce1O54941 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarce1O54941 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarce1O54941 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarce1O54941 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarce1O54941 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Smarce1O54941 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarce1O54941 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC18.21■□□□□ 0.51
Smarce1O54941 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarce1O54941 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smarce1O54941 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Smarce1O54941 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Smarce1O54941 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarce1O54941 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarce1O54941 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarce1O54941 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Smarce1O54941 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarce1O54941 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarce1O54941 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.2■□□□□ 0.5
Smarce1O54941 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarce1O54941 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.2■□□□□ 0.5
Smarce1O54941 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarce1O54941 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarce1O54941 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.2■□□□□ 0.5
Smarce1O54941 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smarce1O54941 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.2■□□□□ 0.5
Smarce1O54941 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.2■□□□□ 0.5
Smarce1O54941 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarce1O54941 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarce1O54941 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Smarce1O54941 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Smarce1O54941 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarce1O54941 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smarce1O54941 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Smarce1O54941 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarce1O54941 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarce1O54941 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarce1O54941 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarce1O54941 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarce1O54941 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.19■□□□□ 0.5
Smarce1O54941 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.19■□□□□ 0.5
Smarce1O54941 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smarce1O54941 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.19■□□□□ 0.5
Smarce1O54941 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarce1O54941 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarce1O54941 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smarce1O54941 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Smarce1O54941 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC18.19■□□□□ 0.5
Smarce1O54941 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarce1O54941 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarce1O54941 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarce1O54941 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms