Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.52■□□□□ 0.08
Limk2O54785 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Limk2O54785 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Limk2O54785 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Limk2O54785 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Limk2O54785 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.52■□□□□ 0.08
Limk2O54785 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Limk2O54785 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Limk2O54785 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Limk2O54785 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Limk2O54785 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.52■□□□□ 0.08
Limk2O54785 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Limk2O54785 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Limk2O54785 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Limk2O54785 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.52■□□□□ 0.07
Limk2O54785 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.52■□□□□ 0.07
Limk2O54785 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Limk2O54785 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Limk2O54785 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Limk2O54785 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Limk2O54785 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Limk2O54785 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Limk2O54785 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Limk2O54785 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Limk2O54785 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Limk2O54785 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.51■□□□□ 0.07
Limk2O54785 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.51■□□□□ 0.07
Limk2O54785 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Limk2O54785 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Limk2O54785 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Limk2O54785 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Limk2O54785 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Limk2O54785 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Limk2O54785 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Limk2O54785 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Limk2O54785 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Limk2O54785 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Limk2O54785 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Limk2O54785 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Limk2O54785 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.51■□□□□ 0.07
Limk2O54785 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Limk2O54785 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Limk2O54785 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Limk2O54785 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Limk2O54785 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Limk2O54785 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Limk2O54785 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Limk2O54785 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Limk2O54785 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.5■□□□□ 0.07
Limk2O54785 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Limk2O54785 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.5■□□□□ 0.07
Limk2O54785 Gm26308-201ENSMUST00000157768 69 ntBASIC15.5■□□□□ 0.07
Limk2O54785 Mir8117-201ENSMUST00000184773 107 ntBASIC15.5■□□□□ 0.07
Limk2O54785 Gm9682-201ENSMUST00000197505 556 ntBASIC15.5■□□□□ 0.07
Limk2O54785 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.5■□□□□ 0.07
Limk2O54785 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Limk2O54785 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Limk2O54785 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Limk2O54785 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Limk2O54785 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Limk2O54785 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Limk2O54785 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Limk2O54785 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Limk2O54785 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Limk2O54785 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.5■□□□□ 0.07
Limk2O54785 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Limk2O54785 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Limk2O54785 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Limk2O54785 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Limk2O54785 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Limk2O54785 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.49■□□□□ 0.07
Limk2O54785 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Limk2O54785 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.49■□□□□ 0.07
Limk2O54785 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Limk2O54785 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Limk2O54785 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Limk2O54785 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Limk2O54785 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Limk2O54785 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.49■□□□□ 0.07
Limk2O54785 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Limk2O54785 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Limk2O54785 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Limk2O54785 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Limk2O54785 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.49■□□□□ 0.07
Limk2O54785 Mir3113-201ENSMUST00000175478 76 ntBASIC15.49■□□□□ 0.07
Limk2O54785 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.49■□□□□ 0.07
Limk2O54785 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Limk2O54785 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Limk2O54785 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Limk2O54785 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.49■□□□□ 0.07
Limk2O54785 Gm10175-201ENSMUST00000086013 645 ntBASIC15.49■□□□□ 0.07
Limk2O54785 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Limk2O54785 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Limk2O54785 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Limk2O54785 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Limk2O54785 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Limk2O54785 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Limk2O54785 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.49■□□□□ 0.07
Limk2O54785 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.49■□□□□ 0.07
Limk2O54785 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms