Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Atf6bO35451 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Atf6bO35451 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.31□□□□□ -0.28
Atf6bO35451 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Gm11780-201ENSMUST00000136880 516 ntBASIC13.31□□□□□ -0.28
Atf6bO35451 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.31□□□□□ -0.28
Atf6bO35451 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Atf6bO35451 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Atf6bO35451 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Atf6bO35451 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Atf6bO35451 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6bO35451 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Atf6bO35451 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.3□□□□□ -0.28
Atf6bO35451 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Atf6bO35451 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.3□□□□□ -0.28
Atf6bO35451 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.3□□□□□ -0.28
Atf6bO35451 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.3□□□□□ -0.28
Atf6bO35451 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Atf6bO35451 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Atf6bO35451 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Atf6bO35451 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.3□□□□□ -0.28
Atf6bO35451 Gm18195-201ENSMUST00000207604 706 ntBASIC13.3□□□□□ -0.28
Atf6bO35451 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.3□□□□□ -0.28
Atf6bO35451 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Atf6bO35451 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6bO35451 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Atf6bO35451 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Atf6bO35451 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6bO35451 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6bO35451 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6bO35451 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6bO35451 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6bO35451 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6bO35451 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6bO35451 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.29□□□□□ -0.28
Atf6bO35451 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.29□□□□□ -0.28
Atf6bO35451 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Atf6bO35451 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.29□□□□□ -0.28
Atf6bO35451 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6bO35451 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.29□□□□□ -0.28
Atf6bO35451 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6bO35451 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.29□□□□□ -0.28
Atf6bO35451 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6bO35451 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6bO35451 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Atf6bO35451 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.29□□□□□ -0.28
Atf6bO35451 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6bO35451 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6bO35451 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Atf6bO35451 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6bO35451 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6bO35451 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6bO35451 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms