Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ube4aE9Q735 Mir7023-201ENSMUST00000185093 64 ntBASIC18.34■□□□□ 0.53
Ube4aE9Q735 Gm20949-201ENSMUST00000206478 952 ntBASIC18.34■□□□□ 0.53
Ube4aE9Q735 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ube4aE9Q735 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.34■□□□□ 0.53
Ube4aE9Q735 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube4aE9Q735 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ube4aE9Q735 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Ube4aE9Q735 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube4aE9Q735 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube4aE9Q735 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Ube4aE9Q735 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube4aE9Q735 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Ube4aE9Q735 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Ube4aE9Q735 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ube4aE9Q735 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC18.33■□□□□ 0.52
Ube4aE9Q735 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ube4aE9Q735 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.33■□□□□ 0.52
Ube4aE9Q735 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ube4aE9Q735 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.33■□□□□ 0.52
Ube4aE9Q735 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC18.33■□□□□ 0.52
Ube4aE9Q735 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.33■□□□□ 0.52
Ube4aE9Q735 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC18.33■□□□□ 0.52
Ube4aE9Q735 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC18.33■□□□□ 0.52
Ube4aE9Q735 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Ube4aE9Q735 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.33■□□□□ 0.52
Ube4aE9Q735 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ube4aE9Q735 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Ube4aE9Q735 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Ube4aE9Q735 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4aE9Q735 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4aE9Q735 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4aE9Q735 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ube4aE9Q735 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4aE9Q735 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4aE9Q735 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4aE9Q735 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4aE9Q735 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4aE9Q735 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.32■□□□□ 0.52
Ube4aE9Q735 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.32■□□□□ 0.52
Ube4aE9Q735 Gm15483-201ENSMUST00000120338 456 ntBASIC18.32■□□□□ 0.52
Ube4aE9Q735 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC18.32■□□□□ 0.52
Ube4aE9Q735 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4aE9Q735 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4aE9Q735 Gm5779-201ENSMUST00000218467 910 ntBASIC18.32■□□□□ 0.52
Ube4aE9Q735 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4aE9Q735 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4aE9Q735 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4aE9Q735 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4aE9Q735 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ube4aE9Q735 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.32■□□□□ 0.52
Ube4aE9Q735 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4aE9Q735 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4aE9Q735 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4aE9Q735 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4aE9Q735 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4aE9Q735 AC154767.3-201ENSMUST00000225150 1342 ntBASIC18.31■□□□□ 0.52
Ube4aE9Q735 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.31■□□□□ 0.52
Ube4aE9Q735 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4aE9Q735 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4aE9Q735 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4aE9Q735 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4aE9Q735 Gm15693-201ENSMUST00000120470 637 ntBASIC18.31■□□□□ 0.52
Ube4aE9Q735 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4aE9Q735 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.31■□□□□ 0.52
Ube4aE9Q735 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4aE9Q735 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC18.31■□□□□ 0.52
Ube4aE9Q735 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4aE9Q735 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ube4aE9Q735 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4aE9Q735 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.31■□□□□ 0.52
Ube4aE9Q735 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Ube4aE9Q735 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4aE9Q735 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4aE9Q735 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4aE9Q735 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.31■□□□□ 0.52
Ube4aE9Q735 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.31■□□□□ 0.52
Ube4aE9Q735 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube4aE9Q735 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4aE9Q735 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4aE9Q735 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4aE9Q735 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4aE9Q735 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4aE9Q735 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4aE9Q735 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4aE9Q735 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4aE9Q735 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ube4aE9Q735 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4aE9Q735 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ube4aE9Q735 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4aE9Q735 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4aE9Q735 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4aE9Q735 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4aE9Q735 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4aE9Q735 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ube4aE9Q735 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4aE9Q735 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4aE9Q735 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4aE9Q735 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube4aE9Q735 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms