Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc85cE9Q6B2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc85cE9Q6B2 Gm7390-201ENSMUST00000212452 1216 ntBASIC18.75■□□□□ 0.59
Ccdc85cE9Q6B2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc85cE9Q6B2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc85cE9Q6B2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc85cE9Q6B2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc85cE9Q6B2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc85cE9Q6B2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc85cE9Q6B2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 Gm13392-201ENSMUST00000117708 150 ntBASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 AC159896.2-201ENSMUST00000214753 269 ntBASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 AC154319.1-201ENSMUST00000216330 312 ntBASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 AL589735.1-201ENSMUST00000224353 270 ntBASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc85cE9Q6B2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Gm5303-201ENSMUST00000117943 1252 ntBASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Gm3436-201ENSMUST00000179930 840 ntBASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Gm42693-201ENSMUST00000196779 631 ntBASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc85cE9Q6B2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc85cE9Q6B2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc85cE9Q6B2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc85cE9Q6B2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.71■□□□□ 0.59
Ccdc85cE9Q6B2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.71■□□□□ 0.59
Ccdc85cE9Q6B2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc85cE9Q6B2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc85cE9Q6B2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.71■□□□□ 0.59
Ccdc85cE9Q6B2 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc85cE9Q6B2 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc85cE9Q6B2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc85cE9Q6B2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC18.71■□□□□ 0.59
Ccdc85cE9Q6B2 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC18.71■□□□□ 0.59
Ccdc85cE9Q6B2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc85cE9Q6B2 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms