Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm28043E0CXC2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm28043E0CXC2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Mir3081-201ENSMUST00000175305 84 ntBASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm28043E0CXC2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Rprl3-201ENSMUST00000157400 290 ntBASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Gm28043E0CXC2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms