Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hfm1D3Z4R1 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hfm1D3Z4R1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Hfm1D3Z4R1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Hfm1D3Z4R1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hfm1D3Z4R1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Hfm1D3Z4R1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Gm43072-201ENSMUST00000200283 1671 ntBASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Gm9115-201ENSMUST00000120192 1348 ntBASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hfm1D3Z4R1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hfm1D3Z4R1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hfm1D3Z4R1 Gm6222-201ENSMUST00000120787 396 ntBASIC21.24■□□□□ 0.99
Hfm1D3Z4R1 Gm12091-201ENSMUST00000146791 830 ntBASIC21.24■□□□□ 0.99
Hfm1D3Z4R1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hfm1D3Z4R1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hfm1D3Z4R1 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hfm1D3Z4R1 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hfm1D3Z4R1 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC21.24■□□□□ 0.99
Hfm1D3Z4R1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hfm1D3Z4R1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hfm1D3Z4R1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hfm1D3Z4R1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hfm1D3Z4R1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hfm1D3Z4R1 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hfm1D3Z4R1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hfm1D3Z4R1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC21.24■□□□□ 0.99
Hfm1D3Z4R1 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hfm1D3Z4R1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hfm1D3Z4R1 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hfm1D3Z4R1 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hfm1D3Z4R1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hfm1D3Z4R1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Hfm1D3Z4R1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC21.23■□□□□ 0.99
Hfm1D3Z4R1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hfm1D3Z4R1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hfm1D3Z4R1 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 Gm21854-201ENSMUST00000179901 471 ntBASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 Gm9522-201ENSMUST00000182394 926 ntBASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 Gm8602-201ENSMUST00000184045 607 ntBASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 Gm37166-201ENSMUST00000195473 2474 ntBASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hfm1D3Z4R1 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms