Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhgb8A0A140LI48 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhgb8A0A140LI48 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms