Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BC053393A0A0B4J1F6 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
BC053393A0A0B4J1F6 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BC053393A0A0B4J1F6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BC053393A0A0B4J1F6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BC053393A0A0B4J1F6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
BC053393A0A0B4J1F6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.3□□□□□ -0.44
BC053393A0A0B4J1F6 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.3□□□□□ -0.44
BC053393A0A0B4J1F6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
BC053393A0A0B4J1F6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BC053393A0A0B4J1F6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Gm13836-201ENSMUST00000121159 501 ntBASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Gm9013-201ENSMUST00000132939 882 ntBASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Gm23634-201ENSMUST00000175071 91 ntBASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Gm5587-201ENSMUST00000206270 674 ntBASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BC053393A0A0B4J1F6 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
BC053393A0A0B4J1F6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
BC053393A0A0B4J1F6 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.27□□□□□ -0.44
BC053393A0A0B4J1F6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
BC053393A0A0B4J1F6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
BC053393A0A0B4J1F6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BC053393A0A0B4J1F6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BC053393A0A0B4J1F6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BC053393A0A0B4J1F6 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BC053393A0A0B4J1F6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.27□□□□□ -0.45
BC053393A0A0B4J1F6 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.27□□□□□ -0.45
BC053393A0A0B4J1F6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BC053393A0A0B4J1F6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BC053393A0A0B4J1F6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BC053393A0A0B4J1F6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BC053393A0A0B4J1F6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BC053393A0A0B4J1F6 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.27□□□□□ -0.45
BC053393A0A0B4J1F6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BC053393A0A0B4J1F6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms