Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Gm7284-201ENSMUST00000131667 944 ntBASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Gm27867-201ENSMUST00000184778 125 ntBASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Gm27704-201ENSMUST00000185094 107 ntBASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9-1A0A075B601 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Gm25745-201ENSMUST00000174945 133 ntBASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Gm9172-201ENSMUST00000212092 954 ntBASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Otx2os1-206ENSMUST00000228153 787 ntBASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9-1A0A075B601 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms