Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.68■□□□□ 0.1
Speer3W4VSP1 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.68■□□□□ 0.1
Speer3W4VSP1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Gm18515-201ENSMUST00000219755 797 ntBASIC15.67■□□□□ 0.1
Speer3W4VSP1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Speer3W4VSP1 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.66■□□□□ 0.1
Speer3W4VSP1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.66■□□□□ 0.1
Speer3W4VSP1 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Speer3W4VSP1 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Speer3W4VSP1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Speer3W4VSP1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.65■□□□□ 0.1
Speer3W4VSP1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Speer3W4VSP1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Speer3W4VSP1 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Speer3W4VSP1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Speer3W4VSP1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Speer3W4VSP1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Speer3W4VSP1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Speer3W4VSP1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Speer3W4VSP1 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Speer3W4VSP1 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.65■□□□□ 0.1
Speer3W4VSP1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Speer3W4VSP1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Speer3W4VSP1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Speer3W4VSP1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Speer3W4VSP1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Speer3W4VSP1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Speer3W4VSP1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.65■□□□□ 0.1
Speer3W4VSP1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.65■□□□□ 0.1
Speer3W4VSP1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Speer3W4VSP1 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Speer3W4VSP1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Speer3W4VSP1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Speer3W4VSP1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Speer3W4VSP1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Speer3W4VSP1 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Speer3W4VSP1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms