Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Auts2-212ENSMUST00000178555 309 ntBASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 BC037039-201ENSMUST00000192003 2205 ntBASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Gm7222-201ENSMUST00000117512 906 ntBASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Chchd1-203ENSMUST00000224633 557 ntBASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.35■□□□□ 0.05
Shroom3Q9QXN0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Shroom3Q9QXN0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Shroom3Q9QXN0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Shroom3Q9QXN0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Shroom3Q9QXN0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Shroom3Q9QXN0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Shroom3Q9QXN0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Shroom3Q9QXN0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.33■□□□□ 0.05
Shroom3Q9QXN0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Shroom3Q9QXN0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.33■□□□□ 0.05
Shroom3Q9QXN0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Shroom3Q9QXN0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Shroom3Q9QXN0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shroom3Q9QXN0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shroom3Q9QXN0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shroom3Q9QXN0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shroom3Q9QXN0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shroom3Q9QXN0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shroom3Q9QXN0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms