Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rhox4bQ9JI43 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rhox4bQ9JI43 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Gm15378-201ENSMUST00000121894 207 ntBASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rhox4bQ9JI43 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Gm37179-201ENSMUST00000194862 823 ntBASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Gm44450-201ENSMUST00000199528 114 ntBASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rhox4bQ9JI43 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms