Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClpxQ9JHS4 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClpxQ9JHS4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClpxQ9JHS4 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ClpxQ9JHS4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ClpxQ9JHS4 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ClpxQ9JHS4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ClpxQ9JHS4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ClpxQ9JHS4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
ClpxQ9JHS4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
ClpxQ9JHS4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
ClpxQ9JHS4 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ClpxQ9JHS4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Gm45328-201ENSMUST00000210942 917 ntBASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.07□□□□□ -0.16
ClpxQ9JHS4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClpxQ9JHS4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ClpxQ9JHS4 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.06□□□□□ -0.16
ClpxQ9JHS4 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ClpxQ9JHS4 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ClpxQ9JHS4 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpxQ9JHS4 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpxQ9JHS4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpxQ9JHS4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.06□□□□□ -0.16
ClpxQ9JHS4 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpxQ9JHS4 Gm27704-201ENSMUST00000185094 107 ntBASIC14.06□□□□□ -0.16
ClpxQ9JHS4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpxQ9JHS4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpxQ9JHS4 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpxQ9JHS4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpxQ9JHS4 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpxQ9JHS4 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ClpxQ9JHS4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms