Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rrp8Q9DB85 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15□□□□□ -0.01
Rrp8Q9DB85 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Rrp8Q9DB85 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rrp8Q9DB85 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15□□□□□ -0.01
Rrp8Q9DB85 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15□□□□□ -0.01
Rrp8Q9DB85 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15□□□□□ -0.01
Rrp8Q9DB85 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15□□□□□ -0.01
Rrp8Q9DB85 AC160980.1-201ENSMUST00000224136 970 ntBASIC15□□□□□ -0.01
Rrp8Q9DB85 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Rrp8Q9DB85 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rrp8Q9DB85 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15□□□□□ -0.01
Rrp8Q9DB85 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rrp8Q9DB85 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rrp8Q9DB85 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rrp8Q9DB85 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15□□□□□ -0.01
Rrp8Q9DB85 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Rrp8Q9DB85 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rrp8Q9DB85 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rrp8Q9DB85 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rrp8Q9DB85 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp8Q9DB85 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm22065-201ENSMUST00000103753 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm22066-201ENSMUST00000103761 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm24932-201ENSMUST00000103763 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm24115-201ENSMUST00000103799 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm22190-201ENSMUST00000103827 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm22191-201ENSMUST00000103831 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm24721-201ENSMUST00000103849 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm28018-201ENSMUST00000103869 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm26399-201ENSMUST00000103937 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm25349-201ENSMUST00000177728 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm23616-201ENSMUST00000177797 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm25871-201ENSMUST00000177816 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm24752-201ENSMUST00000178240 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm24496-201ENSMUST00000178287 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm25649-201ENSMUST00000178476 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm25548-201ENSMUST00000178681 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm23147-201ENSMUST00000178841 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm26095-201ENSMUST00000179270 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm22171-201ENSMUST00000179283 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm23936-201ENSMUST00000179354 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm22619-201ENSMUST00000179516 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm25255-201ENSMUST00000179579 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm24755-201ENSMUST00000179691 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm26506-201ENSMUST00000179692 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm25086-201ENSMUST00000179931 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm23243-201ENSMUST00000180047 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm24659-201ENSMUST00000180212 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm24169-201ENSMUST00000180244 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm23689-201ENSMUST00000180354 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm27359-201ENSMUST00000184153 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm27785-201ENSMUST00000184268 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm27466-201ENSMUST00000184396 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Gm27703-201ENSMUST00000184836 110 ntBASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Rrp8Q9DB85 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms