Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
U2af1Q9D883 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
U2af1Q9D883 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC20.15■□□□□ 0.82
U2af1Q9D883 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
U2af1Q9D883 Mir3113-201ENSMUST00000175478 76 ntBASIC20.15■□□□□ 0.82
U2af1Q9D883 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC20.15■□□□□ 0.82
U2af1Q9D883 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
U2af1Q9D883 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
U2af1Q9D883 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
U2af1Q9D883 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
U2af1Q9D883 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
U2af1Q9D883 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
U2af1Q9D883 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
U2af1Q9D883 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
U2af1Q9D883 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC20.15■□□□□ 0.82
U2af1Q9D883 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.15■□□□□ 0.82
U2af1Q9D883 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC20.15■□□□□ 0.82
U2af1Q9D883 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
U2af1Q9D883 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
U2af1Q9D883 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
U2af1Q9D883 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
U2af1Q9D883 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
U2af1Q9D883 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
U2af1Q9D883 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
U2af1Q9D883 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
U2af1Q9D883 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
U2af1Q9D883 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
U2af1Q9D883 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC20.14■□□□□ 0.81
U2af1Q9D883 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.14■□□□□ 0.81
U2af1Q9D883 Bloc1s5-203ENSMUST00000224902 612 ntBASIC20.14■□□□□ 0.81
U2af1Q9D883 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
U2af1Q9D883 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
U2af1Q9D883 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
U2af1Q9D883 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
U2af1Q9D883 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
U2af1Q9D883 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
U2af1Q9D883 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
U2af1Q9D883 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
U2af1Q9D883 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
U2af1Q9D883 Gm45293-201ENSMUST00000209754 1812 ntBASIC20.13■□□□□ 0.81
U2af1Q9D883 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
U2af1Q9D883 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
U2af1Q9D883 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
U2af1Q9D883 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
U2af1Q9D883 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC20.13■□□□□ 0.81
U2af1Q9D883 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC20.13■□□□□ 0.81
U2af1Q9D883 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC20.13■□□□□ 0.81
U2af1Q9D883 Gm17968-201ENSMUST00000194902 784 ntBASIC20.13■□□□□ 0.81
U2af1Q9D883 Gm7556-201ENSMUST00000201178 1084 ntBASIC20.13■□□□□ 0.81
U2af1Q9D883 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
U2af1Q9D883 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
U2af1Q9D883 Gm10175-201ENSMUST00000086013 645 ntBASIC20.13■□□□□ 0.81
U2af1Q9D883 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
U2af1Q9D883 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
U2af1Q9D883 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
U2af1Q9D883 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
U2af1Q9D883 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
U2af1Q9D883 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
U2af1Q9D883 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
U2af1Q9D883 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
U2af1Q9D883 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2af1Q9D883 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2af1Q9D883 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2af1Q9D883 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
U2af1Q9D883 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2af1Q9D883 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
U2af1Q9D883 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2af1Q9D883 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
U2af1Q9D883 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2af1Q9D883 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2af1Q9D883 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
U2af1Q9D883 Mir8117-201ENSMUST00000184773 107 ntBASIC20.12■□□□□ 0.81
U2af1Q9D883 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC20.12■□□□□ 0.81
U2af1Q9D883 AC159295.1-201ENSMUST00000225326 940 ntBASIC20.12■□□□□ 0.81
U2af1Q9D883 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
U2af1Q9D883 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2af1Q9D883 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2af1Q9D883 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2af1Q9D883 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2af1Q9D883 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2af1Q9D883 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2af1Q9D883 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
U2af1Q9D883 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
U2af1Q9D883 Gm44616-201ENSMUST00000206417 1732 ntBASIC20.11■□□□□ 0.81
U2af1Q9D883 AC130669.1-201ENSMUST00000228537 1672 ntBASIC20.11■□□□□ 0.81
U2af1Q9D883 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
U2af1Q9D883 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
U2af1Q9D883 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.11■□□□□ 0.81
U2af1Q9D883 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
U2af1Q9D883 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
U2af1Q9D883 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
U2af1Q9D883 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
U2af1Q9D883 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
U2af1Q9D883 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
U2af1Q9D883 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC20.11■□□□□ 0.81
U2af1Q9D883 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
U2af1Q9D883 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
U2af1Q9D883 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1Q9D883 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1Q9D883 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms