Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc7Q9D541 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.95■□□□□ 0.46
Ccdc7Q9D541 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.95■□□□□ 0.46
Ccdc7Q9D541 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc7Q9D541 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc7Q9D541 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc7Q9D541 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc7Q9D541 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc7Q9D541 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc7Q9D541 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc7Q9D541 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc7Q9D541 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc7Q9D541 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc7Q9D541 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
Ccdc7Q9D541 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc7Q9D541 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ccdc7Q9D541 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc7Q9D541 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc7Q9D541 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc7Q9D541 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc7Q9D541 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc7Q9D541 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc7Q9D541 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc7Q9D541 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc7Q9D541 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Gm17807-201ENSMUST00000186869 298 ntBASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Gm6296-201ENSMUST00000222599 943 ntBASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc7Q9D541 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc7Q9D541 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc7Q9D541 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc7Q9D541 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.92■□□□□ 0.46
Ccdc7Q9D541 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc7Q9D541 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc7Q9D541 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc7Q9D541 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc7Q9D541 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc7Q9D541 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc7Q9D541 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.92■□□□□ 0.46
Ccdc7Q9D541 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.92■□□□□ 0.46
Ccdc7Q9D541 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.92■□□□□ 0.46
Ccdc7Q9D541 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.92■□□□□ 0.46
Ccdc7Q9D541 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc7Q9D541 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc7Q9D541 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc7Q9D541 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc7Q9D541 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc7Q9D541 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc7Q9D541 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ccdc7Q9D541 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.91■□□□□ 0.46
Ccdc7Q9D541 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc7Q9D541 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms