Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.85■□□□□ 0.29
Cfap53Q9D439 Gm17971-201ENSMUST00000190239 806 ntBASIC16.85■□□□□ 0.29
Cfap53Q9D439 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.85■□□□□ 0.29
Cfap53Q9D439 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap53Q9D439 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.85■□□□□ 0.29
Cfap53Q9D439 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.85■□□□□ 0.29
Cfap53Q9D439 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.85■□□□□ 0.29
Cfap53Q9D439 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Cfap53Q9D439 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap53Q9D439 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap53Q9D439 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.85■□□□□ 0.29
Cfap53Q9D439 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap53Q9D439 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap53Q9D439 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cfap53Q9D439 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cfap53Q9D439 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.85■□□□□ 0.29
Cfap53Q9D439 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap53Q9D439 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.84■□□□□ 0.29
Cfap53Q9D439 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.84■□□□□ 0.29
Cfap53Q9D439 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap53Q9D439 Asic1-205ENSMUST00000228185 1818 ntBASIC16.84■□□□□ 0.29
Cfap53Q9D439 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap53Q9D439 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cfap53Q9D439 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Cfap53Q9D439 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.83■□□□□ 0.29
Cfap53Q9D439 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cfap53Q9D439 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cfap53Q9D439 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cfap53Q9D439 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cfap53Q9D439 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap53Q9D439 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap53Q9D439 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap53Q9D439 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Cfap53Q9D439 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.83■□□□□ 0.28
Cfap53Q9D439 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.83■□□□□ 0.28
Cfap53Q9D439 Gm7153-201ENSMUST00000117092 455 ntBASIC16.83■□□□□ 0.28
Cfap53Q9D439 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.83■□□□□ 0.28
Cfap53Q9D439 Gm15358-201ENSMUST00000119249 520 ntBASIC16.83■□□□□ 0.28
Cfap53Q9D439 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.83■□□□□ 0.28
Cfap53Q9D439 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap53Q9D439 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap53Q9D439 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cfap53Q9D439 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap53Q9D439 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap53Q9D439 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.83■□□□□ 0.28
Cfap53Q9D439 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.83■□□□□ 0.28
Cfap53Q9D439 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap53Q9D439 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap53Q9D439 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap53Q9D439 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap53Q9D439 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap53Q9D439 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Cfap53Q9D439 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap53Q9D439 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap53Q9D439 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap53Q9D439 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap53Q9D439 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cfap53Q9D439 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms