Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chaf1bQ9D0N7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chaf1bQ9D0N7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chaf1bQ9D0N7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.46□□□□□ -0.09
Chaf1bQ9D0N7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chaf1bQ9D0N7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chaf1bQ9D0N7 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chaf1bQ9D0N7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chaf1bQ9D0N7 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chaf1bQ9D0N7 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.1
Chaf1bQ9D0N7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chaf1bQ9D0N7 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.46□□□□□ -0.1
Chaf1bQ9D0N7 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Chaf1bQ9D0N7 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chaf1bQ9D0N7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Gm27011-201ENSMUST00000182352 972 ntBASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Gm27389-201ENSMUST00000183622 195 ntBASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Gm7889-201ENSMUST00000185591 958 ntBASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Gm18959-201ENSMUST00000208954 655 ntBASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.45□□□□□ -0.1
Chaf1bQ9D0N7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chaf1bQ9D0N7 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chaf1bQ9D0N7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chaf1bQ9D0N7 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chaf1bQ9D0N7 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chaf1bQ9D0N7 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chaf1bQ9D0N7 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chaf1bQ9D0N7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.44□□□□□ -0.1
Chaf1bQ9D0N7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chaf1bQ9D0N7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.44□□□□□ -0.1
Chaf1bQ9D0N7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Chaf1bQ9D0N7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chaf1bQ9D0N7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chaf1bQ9D0N7 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.44□□□□□ -0.1
Chaf1bQ9D0N7 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Chaf1bQ9D0N7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chaf1bQ9D0N7 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chaf1bQ9D0N7 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.44□□□□□ -0.1
Chaf1bQ9D0N7 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chaf1bQ9D0N7 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chaf1bQ9D0N7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chaf1bQ9D0N7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Gm45058-201ENSMUST00000205810 766 ntBASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chaf1bQ9D0N7 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1bQ9D0N7 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms