Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.21□□□□□ -0.13
Trim13Q9CYB0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim13Q9CYB0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim13Q9CYB0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim13Q9CYB0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim13Q9CYB0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim13Q9CYB0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim13Q9CYB0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trim13Q9CYB0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim13Q9CYB0 Gm6433-201ENSMUST00000118634 875 ntBASIC14.21□□□□□ -0.13
Trim13Q9CYB0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim13Q9CYB0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trim13Q9CYB0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.21□□□□□ -0.13
Trim13Q9CYB0 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.21□□□□□ -0.13
Trim13Q9CYB0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim13Q9CYB0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim13Q9CYB0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Trim13Q9CYB0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trim13Q9CYB0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim13Q9CYB0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim13Q9CYB0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Gm6257-201ENSMUST00000163864 910 ntBASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Gm37722-201ENSMUST00000193757 208 ntBASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim13Q9CYB0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim13Q9CYB0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms