Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh15Q99PJ1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdh15Q99PJ1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh15Q99PJ1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh15Q99PJ1 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh15Q99PJ1 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh15Q99PJ1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdh15Q99PJ1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh15Q99PJ1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh15Q99PJ1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh15Q99PJ1 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh15Q99PJ1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdh15Q99PJ1 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdh15Q99PJ1 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdh15Q99PJ1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Pcdh15Q99PJ1 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh15Q99PJ1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh15Q99PJ1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh15Q99PJ1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh15Q99PJ1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh15Q99PJ1 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh15Q99PJ1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh15Q99PJ1 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC17.13■□□□□ 0.33
Pcdh15Q99PJ1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh15Q99PJ1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh15Q99PJ1 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh15Q99PJ1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh15Q99PJ1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.13■□□□□ 0.33
Pcdh15Q99PJ1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh15Q99PJ1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh15Q99PJ1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh15Q99PJ1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh15Q99PJ1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh15Q99PJ1 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh15Q99PJ1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Pcdh15Q99PJ1 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh15Q99PJ1 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.12■□□□□ 0.33
Pcdh15Q99PJ1 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh15Q99PJ1 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh15Q99PJ1 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdh15Q99PJ1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh15Q99PJ1 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh15Q99PJ1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh15Q99PJ1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdh15Q99PJ1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdh15Q99PJ1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh15Q99PJ1 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh15Q99PJ1 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdh15Q99PJ1 Gm27701-201ENSMUST00000184498 110 ntBASIC17.11■□□□□ 0.33
Pcdh15Q99PJ1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh15Q99PJ1 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh15Q99PJ1 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdh15Q99PJ1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh15Q99PJ1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh15Q99PJ1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh15Q99PJ1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Pcdh15Q99PJ1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh15Q99PJ1 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdh15Q99PJ1 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh15Q99PJ1 Ldha-ps-201ENSMUST00000119390 995 ntBASIC17.11■□□□□ 0.33
Pcdh15Q99PJ1 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh15Q99PJ1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdh15Q99PJ1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh15Q99PJ1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh15Q99PJ1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh15Q99PJ1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh15Q99PJ1 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh15Q99PJ1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdh15Q99PJ1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh15Q99PJ1 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdh15Q99PJ1 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh15Q99PJ1 Mir1894-201ENSMUST00000122802 81 ntBASIC17.1■□□□□ 0.33
Pcdh15Q99PJ1 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdh15Q99PJ1 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC17.1■□□□□ 0.33
Pcdh15Q99PJ1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh15Q99PJ1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh15Q99PJ1 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh15Q99PJ1 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.1■□□□□ 0.33
Pcdh15Q99PJ1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh15Q99PJ1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh15Q99PJ1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh15Q99PJ1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdh15Q99PJ1 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh15Q99PJ1 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh15Q99PJ1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdh15Q99PJ1 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh15Q99PJ1 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC17.09■□□□□ 0.33
Pcdh15Q99PJ1 Gm45098-201ENSMUST00000207179 657 ntBASIC17.09■□□□□ 0.33
Pcdh15Q99PJ1 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh15Q99PJ1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh15Q99PJ1 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh15Q99PJ1 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdh15Q99PJ1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh15Q99PJ1 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh15Q99PJ1 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.09■□□□□ 0.33
Pcdh15Q99PJ1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh15Q99PJ1 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.09■□□□□ 0.33
Pcdh15Q99PJ1 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh15Q99PJ1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh15Q99PJ1 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms