Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.04■□□□□ 0.16
Pcdha3Q91Y16 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.04■□□□□ 0.16
Pcdha3Q91Y16 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha3Q91Y16 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.04■□□□□ 0.16
Pcdha3Q91Y16 AV026068-213ENSMUST00000223675 1171 ntBASIC16.04■□□□□ 0.16
Pcdha3Q91Y16 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha3Q91Y16 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha3Q91Y16 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha3Q91Y16 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Pcdha3Q91Y16 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha3Q91Y16 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha3Q91Y16 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha3Q91Y16 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha3Q91Y16 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha3Q91Y16 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha3Q91Y16 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Gm15358-201ENSMUST00000119249 520 ntBASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Mir5126-201ENSMUST00000175513 77 ntBASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha3Q91Y16 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 Gm27646-201ENSMUST00000183989 110 ntBASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha3Q91Y16 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha3Q91Y16 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha3Q91Y16 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha3Q91Y16 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha3Q91Y16 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.02■□□□□ 0.15
Pcdha3Q91Y16 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha3Q91Y16 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha3Q91Y16 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Pcdha3Q91Y16 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha3Q91Y16 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms