Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Gm5177-201ENSMUST00000183092 997 ntBASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Prob1-201ENSMUST00000097619 3021 ntBASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb18Q91Y02 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb18Q91Y02 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb18Q91Y02 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb18Q91Y02 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb18Q91Y02 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Pcdhb18Q91Y02 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb18Q91Y02 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb18Q91Y02 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb18Q91Y02 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb18Q91Y02 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb18Q91Y02 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb18Q91Y02 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Pcdhb18Q91Y02 Gm7063-201ENSMUST00000186840 981 ntBASIC16.02■□□□□ 0.16
Pcdhb18Q91Y02 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.02■□□□□ 0.16
Pcdhb18Q91Y02 Gm44872-201ENSMUST00000207864 420 ntBASIC16.02■□□□□ 0.16
Pcdhb18Q91Y02 Gm45747-201ENSMUST00000212203 999 ntBASIC16.02■□□□□ 0.16
Pcdhb18Q91Y02 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.02■□□□□ 0.16
Pcdhb18Q91Y02 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.02■□□□□ 0.16
Pcdhb18Q91Y02 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb18Q91Y02 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb18Q91Y02 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb18Q91Y02 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb18Q91Y02 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb18Q91Y02 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb18Q91Y02 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb18Q91Y02 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb18Q91Y02 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb18Q91Y02 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb18Q91Y02 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb18Q91Y02 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb18Q91Y02 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb18Q91Y02 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Pcdhb18Q91Y02 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Gm15427-201ENSMUST00000117288 531 ntBASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb18Q91Y02 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms