Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm24721-201ENSMUST00000103849 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm28018-201ENSMUST00000103869 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm26399-201ENSMUST00000103937 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm6973-201ENSMUST00000117080 721 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm25349-201ENSMUST00000177728 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm23616-201ENSMUST00000177797 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm25871-201ENSMUST00000177816 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm24752-201ENSMUST00000178240 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm24496-201ENSMUST00000178287 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm25649-201ENSMUST00000178476 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm25548-201ENSMUST00000178681 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm23147-201ENSMUST00000178841 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm26095-201ENSMUST00000179270 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm22171-201ENSMUST00000179283 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm23936-201ENSMUST00000179354 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm22619-201ENSMUST00000179516 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm25255-201ENSMUST00000179579 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm24755-201ENSMUST00000179691 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm26506-201ENSMUST00000179692 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm25086-201ENSMUST00000179931 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm23243-201ENSMUST00000180047 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm24659-201ENSMUST00000180212 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm24169-201ENSMUST00000180244 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm23689-201ENSMUST00000180354 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm27359-201ENSMUST00000184153 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm27785-201ENSMUST00000184268 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm27466-201ENSMUST00000184396 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm27703-201ENSMUST00000184836 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trex1Q91XB0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trex1Q91XB0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Trex1Q91XB0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trex1Q91XB0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trex1Q91XB0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trex1Q91XB0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trex1Q91XB0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trex1Q91XB0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.52■□□□□ 0.4
Trex1Q91XB0 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.52■□□□□ 0.4
Trex1Q91XB0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.52■□□□□ 0.4
Trex1Q91XB0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trex1Q91XB0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.52■□□□□ 0.4
Trex1Q91XB0 Gm22175-201ENSMUST00000175007 78 ntBASIC17.52■□□□□ 0.4
Trex1Q91XB0 Gm7774-201ENSMUST00000200064 533 ntBASIC17.52■□□□□ 0.4
Trex1Q91XB0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trex1Q91XB0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trex1Q91XB0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.52■□□□□ 0.4
Trex1Q91XB0 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.52■□□□□ 0.4
Trex1Q91XB0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trex1Q91XB0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trex1Q91XB0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trex1Q91XB0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Trex1Q91XB0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trex1Q91XB0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
Trex1Q91XB0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Trex1Q91XB0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trex1Q91XB0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trex1Q91XB0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trex1Q91XB0 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trex1Q91XB0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trex1Q91XB0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trex1Q91XB0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trex1Q91XB0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trex1Q91XB0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trex1Q91XB0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trex1Q91XB0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trex1Q91XB0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trex1Q91XB0 Gm20949-201ENSMUST00000206478 952 ntBASIC17.51■□□□□ 0.39
Trex1Q91XB0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trex1Q91XB0 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.51■□□□□ 0.39
Trex1Q91XB0 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.51■□□□□ 0.39
Trex1Q91XB0 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.51■□□□□ 0.39
Trex1Q91XB0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trex1Q91XB0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trex1Q91XB0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trex1Q91XB0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trex1Q91XB0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trex1Q91XB0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trex1Q91XB0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trex1Q91XB0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trex1Q91XB0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trex1Q91XB0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trex1Q91XB0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trex1Q91XB0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trex1Q91XB0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trex1Q91XB0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trex1Q91XB0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms