Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afjQ8R1M2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afjQ8R1M2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afjQ8R1M2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afjQ8R1M2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afjQ8R1M2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afjQ8R1M2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afjQ8R1M2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afjQ8R1M2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afjQ8R1M2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
H2afjQ8R1M2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Gm6257-201ENSMUST00000163864 910 ntBASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afjQ8R1M2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms