Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn1Q8K445 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn1Q8K445 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn1Q8K445 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Clrn1Q8K445 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn1Q8K445 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.51□□□□□ -0.09
Clrn1Q8K445 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Clrn1Q8K445 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.51□□□□□ -0.09
Clrn1Q8K445 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn1Q8K445 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.51□□□□□ -0.09
Clrn1Q8K445 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.51□□□□□ -0.09
Clrn1Q8K445 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clrn1Q8K445 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clrn1Q8K445 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clrn1Q8K445 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Clrn1Q8K445 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clrn1Q8K445 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Clrn1Q8K445 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Clrn1Q8K445 Gm25990-201ENSMUST00000102440 86 ntBASIC14.5□□□□□ -0.09
Clrn1Q8K445 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Clrn1Q8K445 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.5□□□□□ -0.09
Clrn1Q8K445 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.5□□□□□ -0.09
Clrn1Q8K445 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Clrn1Q8K445 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.5□□□□□ -0.09
Clrn1Q8K445 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.5□□□□□ -0.09
Clrn1Q8K445 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.5□□□□□ -0.09
Clrn1Q8K445 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.5□□□□□ -0.09
Clrn1Q8K445 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Clrn1Q8K445 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clrn1Q8K445 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Clrn1Q8K445 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clrn1Q8K445 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Clrn1Q8K445 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.49□□□□□ -0.09
Clrn1Q8K445 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Gm14722-201ENSMUST00000118943 689 ntBASIC14.49□□□□□ -0.09
Clrn1Q8K445 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Gm6089-201ENSMUST00000197666 938 ntBASIC14.49□□□□□ -0.09
Clrn1Q8K445 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clrn1Q8K445 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Clrn1Q8K445 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Clrn1Q8K445 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Clrn1Q8K445 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.48□□□□□ -0.09
Clrn1Q8K445 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms