Protein–RNA interactions for Protein: Q8K389

Cdk5rap2, CDK5 regulatory subunit-associated protein 2, mousemouse

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap2Q8K389 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk5rap2Q8K389 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk5rap2Q8K389 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk5rap2Q8K389 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk5rap2Q8K389 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk5rap2Q8K389 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk5rap2Q8K389 Gm44616-201ENSMUST00000206417 1732 ntBASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Gm24543-201ENSMUST00000103867 82 ntBASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Gm6539-201ENSMUST00000119157 1064 ntBASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 AC132863.2-201ENSMUST00000226643 799 ntBASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Gm6756-201ENSMUST00000180647 1620 ntBASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap2Q8K389 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdk5rap2Q8K389 Gm27528-202ENSMUST00000222916 2012 ntBASIC20.61■□□□□ 0.89
Cdk5rap2Q8K389 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdk5rap2Q8K389 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdk5rap2Q8K389 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Cdk5rap2Q8K389 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cdk5rap2Q8K389 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC20.61■□□□□ 0.89
Cdk5rap2Q8K389 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC20.61■□□□□ 0.89
Cdk5rap2Q8K389 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
Cdk5rap2Q8K389 Gm6888-201ENSMUST00000221983 706 ntBASIC20.61■□□□□ 0.89
Cdk5rap2Q8K389 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdk5rap2Q8K389 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdk5rap2Q8K389 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdk5rap2Q8K389 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cdk5rap2Q8K389 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdk5rap2Q8K389 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cdk5rap2Q8K389 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk5rap2Q8K389 Tfap2a-203ENSMUST00000223869 2037 ntBASIC20.6■□□□□ 0.89
Cdk5rap2Q8K389 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk5rap2Q8K389 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Cdk5rap2Q8K389 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC20.6■□□□□ 0.89
Cdk5rap2Q8K389 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk5rap2Q8K389 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC20.6■□□□□ 0.89
Cdk5rap2Q8K389 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk5rap2Q8K389 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk5rap2Q8K389 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cdk5rap2Q8K389 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk5rap2Q8K389 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk5rap2Q8K389 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Cdk5rap2Q8K389 Gm14767-201ENSMUST00000121559 586 ntBASIC20.6■□□□□ 0.89
Cdk5rap2Q8K389 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC20.6■□□□□ 0.89
Cdk5rap2Q8K389 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk5rap2Q8K389 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk5rap2Q8K389 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC20.6■□□□□ 0.89
Cdk5rap2Q8K389 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC20.6■□□□□ 0.89
Cdk5rap2Q8K389 AC149588.3-201ENSMUST00000227515 150 ntBASIC20.6■□□□□ 0.89
Cdk5rap2Q8K389 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk5rap2Q8K389 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk5rap2Q8K389 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk5rap2Q8K389 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk5rap2Q8K389 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk5rap2Q8K389 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk5rap2Q8K389 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
Cdk5rap2Q8K389 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk5rap2Q8K389 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk5rap2Q8K389 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC20.59■□□□□ 0.89
Cdk5rap2Q8K389 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC20.59■□□□□ 0.89
Cdk5rap2Q8K389 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk5rap2Q8K389 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk5rap2Q8K389 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk5rap2Q8K389 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk5rap2Q8K389 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cdk5rap2Q8K389 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk5rap2Q8K389 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk5rap2Q8K389 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC20.59■□□□□ 0.89
Cdk5rap2Q8K389 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdk5rap2Q8K389 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Cdk5rap2Q8K389 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdk5rap2Q8K389 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdk5rap2Q8K389 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdk5rap2Q8K389 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC20.58■□□□□ 0.89
Cdk5rap2Q8K389 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdk5rap2Q8K389 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdk5rap2Q8K389 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdk5rap2Q8K389 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdk5rap2Q8K389 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms