Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm13312-201ENSMUST00000119631 718 ntBASIC16.21■□□□□ 0.19
Ccdc28aQ8CEI3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc28aQ8CEI3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc28aQ8CEI3 Gm45328-201ENSMUST00000210942 917 ntBASIC16.21■□□□□ 0.19
Ccdc28aQ8CEI3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Ccdc28aQ8CEI3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Ccdc28aQ8CEI3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc28aQ8CEI3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc28aQ8CEI3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc28aQ8CEI3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc28aQ8CEI3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc28aQ8CEI3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Gm11950-201ENSMUST00000121615 838 ntBASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc28aQ8CEI3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc28aQ8CEI3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Efs-202ENSMUST00000227037 2540 ntBASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc28aQ8CEI3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc28aQ8CEI3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc28aQ8CEI3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc28aQ8CEI3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc28aQ8CEI3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc28aQ8CEI3 Gm6345-202ENSMUST00000180900 204 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms