Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc38Q8CDN8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc38Q8CDN8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Gm8097-201ENSMUST00000117903 829 ntBASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Gm12644-201ENSMUST00000119935 606 ntBASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc38Q8CDN8 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.04■□□□□ 0.32
Ccdc38Q8CDN8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc38Q8CDN8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc38Q8CDN8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc38Q8CDN8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc38Q8CDN8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc38Q8CDN8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc38Q8CDN8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc38Q8CDN8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc38Q8CDN8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Ccdc38Q8CDN8 Gm15358-201ENSMUST00000119249 520 ntBASIC17.04■□□□□ 0.32
Ccdc38Q8CDN8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc38Q8CDN8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.04■□□□□ 0.32
Ccdc38Q8CDN8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ccdc38Q8CDN8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc38Q8CDN8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc38Q8CDN8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc38Q8CDN8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc38Q8CDN8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms