Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Uba3Q8C878 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Uba3Q8C878 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Uba3Q8C878 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Uba3Q8C878 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Uba3Q8C878 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.17■□□□□ 0.18
Uba3Q8C878 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.17■□□□□ 0.18
Uba3Q8C878 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.17■□□□□ 0.18
Uba3Q8C878 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Uba3Q8C878 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.17■□□□□ 0.18
Uba3Q8C878 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Uba3Q8C878 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Uba3Q8C878 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Uba3Q8C878 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Uba3Q8C878 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Uba3Q8C878 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Uba3Q8C878 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Uba3Q8C878 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Uba3Q8C878 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Uba3Q8C878 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Uba3Q8C878 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Uba3Q8C878 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Uba3Q8C878 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Uba3Q8C878 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Uba3Q8C878 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Uba3Q8C878 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Uba3Q8C878 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.16■□□□□ 0.18
Uba3Q8C878 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Uba3Q8C878 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.16■□□□□ 0.18
Uba3Q8C878 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Uba3Q8C878 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.16■□□□□ 0.18
Uba3Q8C878 Gm9682-201ENSMUST00000197505 556 ntBASIC16.16■□□□□ 0.18
Uba3Q8C878 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Uba3Q8C878 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Uba3Q8C878 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Uba3Q8C878 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.16■□□□□ 0.18
Uba3Q8C878 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Uba3Q8C878 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Uba3Q8C878 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.16■□□□□ 0.18
Uba3Q8C878 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.16■□□□□ 0.18
Uba3Q8C878 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Uba3Q8C878 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Uba3Q8C878 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Uba3Q8C878 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Uba3Q8C878 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Uba3Q8C878 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Uba3Q8C878 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Uba3Q8C878 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 Gm11764-201ENSMUST00000120221 623 ntBASIC16.15■□□□□ 0.18
Uba3Q8C878 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.15■□□□□ 0.18
Uba3Q8C878 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 Gm18489-201ENSMUST00000172565 551 ntBASIC16.15■□□□□ 0.18
Uba3Q8C878 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Uba3Q8C878 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.15■□□□□ 0.18
Uba3Q8C878 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.15■□□□□ 0.18
Uba3Q8C878 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.15■□□□□ 0.18
Uba3Q8C878 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Uba3Q8C878 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Uba3Q8C878 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Uba3Q8C878 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.14■□□□□ 0.17
Uba3Q8C878 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uba3Q8C878 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.14■□□□□ 0.17
Uba3Q8C878 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uba3Q8C878 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uba3Q8C878 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uba3Q8C878 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uba3Q8C878 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uba3Q8C878 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uba3Q8C878 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uba3Q8C878 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Uba3Q8C878 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Uba3Q8C878 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Uba3Q8C878 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.14■□□□□ 0.17
Uba3Q8C878 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.14■□□□□ 0.17
Uba3Q8C878 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Uba3Q8C878 Gm4899-201ENSMUST00000178708 719 ntBASIC16.14■□□□□ 0.17
Uba3Q8C878 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.14■□□□□ 0.17
Uba3Q8C878 Gm44771-201ENSMUST00000206975 626 ntBASIC16.14■□□□□ 0.17
Uba3Q8C878 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uba3Q8C878 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms