Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.94■□□□□ 0.46
Usp44Q8C2S0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Gm18246-201ENSMUST00000221023 728 ntBASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp44Q8C2S0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp44Q8C2S0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms