Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf3Q8C120 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16■□□□□ 0.15
Sh3rf3Q8C120 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16■□□□□ 0.15
Sh3rf3Q8C120 AC160980.1-201ENSMUST00000224136 970 ntBASIC16■□□□□ 0.15
Sh3rf3Q8C120 AC158538.2-201ENSMUST00000225455 906 ntBASIC16■□□□□ 0.15
Sh3rf3Q8C120 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf3Q8C120 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3rf3Q8C120 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Gm11452-201ENSMUST00000122376 690 ntBASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3rf3Q8C120 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Gm7153-201ENSMUST00000117092 455 ntBASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Gm15358-201ENSMUST00000119249 520 ntBASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms