Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap1Q8BTW8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap1Q8BTW8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Gm43575-201ENSMUST00000196420 516 ntBASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdk5rap1Q8BTW8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cdk5rap1Q8BTW8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap1Q8BTW8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms