Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.02■□□□□ -0
Pcdh20Q8BIZ0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh20Q8BIZ0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.02■□□□□ -0
Pcdh20Q8BIZ0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh20Q8BIZ0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh20Q8BIZ0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh20Q8BIZ0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh20Q8BIZ0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh20Q8BIZ0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh20Q8BIZ0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh20Q8BIZ0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh20Q8BIZ0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh20Q8BIZ0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh20Q8BIZ0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh20Q8BIZ0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh20Q8BIZ0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh20Q8BIZ0 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.98□□□□□ -0.01
Pcdh20Q8BIZ0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh20Q8BIZ0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh20Q8BIZ0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh20Q8BIZ0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh20Q8BIZ0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms