Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf38Q8BI21 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Rnf38Q8BI21 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf38Q8BI21 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Rnf38Q8BI21 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf38Q8BI21 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.83□□□□□ -0.04
Rnf38Q8BI21 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.83□□□□□ -0.04
Rnf38Q8BI21 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf38Q8BI21 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf38Q8BI21 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf38Q8BI21 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf38Q8BI21 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Rnf38Q8BI21 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf38Q8BI21 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf38Q8BI21 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf38Q8BI21 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf38Q8BI21 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf38Q8BI21 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Gm7284-201ENSMUST00000131667 944 ntBASIC14.82□□□□□ -0.04
Rnf38Q8BI21 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf38Q8BI21 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Gm27742-201ENSMUST00000184667 60 ntBASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf38Q8BI21 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms