Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.2■□□□□ 0.34
Trnp1Q80ZI1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trnp1Q80ZI1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trnp1Q80ZI1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trnp1Q80ZI1 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trnp1Q80ZI1 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.2■□□□□ 0.34
Trnp1Q80ZI1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trnp1Q80ZI1 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trnp1Q80ZI1 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Trnp1Q80ZI1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.2■□□□□ 0.34
Trnp1Q80ZI1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trnp1Q80ZI1 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trnp1Q80ZI1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trnp1Q80ZI1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trnp1Q80ZI1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trnp1Q80ZI1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trnp1Q80ZI1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trnp1Q80ZI1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trnp1Q80ZI1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.2■□□□□ 0.34
Trnp1Q80ZI1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trnp1Q80ZI1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Gm24543-201ENSMUST00000103867 82 ntBASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Gm29667-201ENSMUST00000190817 490 ntBASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnp1Q80ZI1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trnp1Q80ZI1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.18■□□□□ 0.34
Trnp1Q80ZI1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trnp1Q80ZI1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trnp1Q80ZI1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trnp1Q80ZI1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trnp1Q80ZI1 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.18■□□□□ 0.34
Trnp1Q80ZI1 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.18■□□□□ 0.34
Trnp1Q80ZI1 Gm5566-201ENSMUST00000116118 459 ntBASIC17.18■□□□□ 0.34
Trnp1Q80ZI1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trnp1Q80ZI1 Gm9719-201ENSMUST00000162765 543 ntBASIC17.18■□□□□ 0.34
Trnp1Q80ZI1 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC17.18■□□□□ 0.34
Trnp1Q80ZI1 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.18■□□□□ 0.34
Trnp1Q80ZI1 Gm25857-201ENSMUST00000082788 129 ntBASIC17.18■□□□□ 0.34
Trnp1Q80ZI1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trnp1Q80ZI1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Trnp1Q80ZI1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trnp1Q80ZI1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Trnp1Q80ZI1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trnp1Q80ZI1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.18■□□□□ 0.34
Trnp1Q80ZI1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trnp1Q80ZI1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnp1Q80ZI1 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.17■□□□□ 0.34
Trnp1Q80ZI1 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Trnp1Q80ZI1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.17■□□□□ 0.34
Trnp1Q80ZI1 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.17■□□□□ 0.34
Trnp1Q80ZI1 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnp1Q80ZI1 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trnp1Q80ZI1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.17■□□□□ 0.34
Trnp1Q80ZI1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnp1Q80ZI1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.17■□□□□ 0.34
Trnp1Q80ZI1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnp1Q80ZI1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnp1Q80ZI1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trnp1Q80ZI1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnp1Q80ZI1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnp1Q80ZI1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trnp1Q80ZI1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trnp1Q80ZI1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms