Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc28Q80XJ3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc28Q80XJ3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.83□□□□□ -0.36
Ttc28Q80XJ3 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.83□□□□□ -0.36
Ttc28Q80XJ3 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.83□□□□□ -0.36
Ttc28Q80XJ3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc28Q80XJ3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ttc28Q80XJ3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc28Q80XJ3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc28Q80XJ3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc28Q80XJ3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ttc28Q80XJ3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Gm22189-201ENSMUST00000103822 86 ntBASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Gm10499-201ENSMUST00000174094 934 ntBASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc28Q80XJ3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Mir3102-201ENSMUST00000175555 104 ntBASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Shd-206ENSMUST00000225145 998 ntBASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Syt7-204ENSMUST00000223586 1344 ntBASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Gm15483-201ENSMUST00000120338 456 ntBASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Mir3547-201ENSMUST00000175461 88 ntBASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Gm27838-201ENSMUST00000184829 128 ntBASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Gm43703-201ENSMUST00000200523 763 ntBASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc28Q80XJ3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Gm7775-201ENSMUST00000218871 853 ntBASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms