Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh8Q7TSK3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh8Q7TSK3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh8Q7TSK3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh8Q7TSK3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh8Q7TSK3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh8Q7TSK3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh8Q7TSK3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh8Q7TSK3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh8Q7TSK3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh8Q7TSK3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh8Q7TSK3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Gm17271-201ENSMUST00000165535 355 ntBASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh8Q7TSK3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh8Q7TSK3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Gm23935-201ENSMUST00000102303 57 ntBASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Gm24270-201ENSMUST00000102326 57 ntBASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Gm24245-201ENSMUST00000157318 57 ntBASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh8Q7TSK3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms