Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC21.48■■□□□ 1.03
ShprhQ7TPQ3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
ShprhQ7TPQ3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
ShprhQ7TPQ3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
ShprhQ7TPQ3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC21.47■■□□□ 1.03
ShprhQ7TPQ3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ShprhQ7TPQ3 Gm6222-201ENSMUST00000120787 396 ntBASIC21.47■■□□□ 1.03
ShprhQ7TPQ3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ShprhQ7TPQ3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC21.47■■□□□ 1.03
ShprhQ7TPQ3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ShprhQ7TPQ3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC21.47■■□□□ 1.03
ShprhQ7TPQ3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC21.47■■□□□ 1.03
ShprhQ7TPQ3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
ShprhQ7TPQ3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
ShprhQ7TPQ3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC21.47■■□□□ 1.03
ShprhQ7TPQ3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ShprhQ7TPQ3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC21.47■■□□□ 1.03
ShprhQ7TPQ3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ShprhQ7TPQ3 Gm5320-201ENSMUST00000207163 1519 ntBASIC21.47■■□□□ 1.03
ShprhQ7TPQ3 Gm6218-201ENSMUST00000219812 628 ntBASIC21.47■■□□□ 1.03
ShprhQ7TPQ3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC21.47■■□□□ 1.03
ShprhQ7TPQ3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ShprhQ7TPQ3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
ShprhQ7TPQ3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ShprhQ7TPQ3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ShprhQ7TPQ3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ShprhQ7TPQ3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ShprhQ7TPQ3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ShprhQ7TPQ3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ShprhQ7TPQ3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ShprhQ7TPQ3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
ShprhQ7TPQ3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC21.46■■□□□ 1.03
ShprhQ7TPQ3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ShprhQ7TPQ3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ShprhQ7TPQ3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ShprhQ7TPQ3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ShprhQ7TPQ3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ShprhQ7TPQ3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
ShprhQ7TPQ3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ShprhQ7TPQ3 Gm37166-201ENSMUST00000195473 2474 ntBASIC21.45■■□□□ 1.02
ShprhQ7TPQ3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ShprhQ7TPQ3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
ShprhQ7TPQ3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ShprhQ7TPQ3 Gm9794-201ENSMUST00000202370 423 ntBASIC21.45■■□□□ 1.02
ShprhQ7TPQ3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
ShprhQ7TPQ3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.02
ShprhQ7TPQ3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
ShprhQ7TPQ3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ShprhQ7TPQ3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ShprhQ7TPQ3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
ShprhQ7TPQ3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ShprhQ7TPQ3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
ShprhQ7TPQ3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Gm14042-201ENSMUST00000120139 833 ntBASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Gm3436-201ENSMUST00000179930 840 ntBASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Gm8242-201ENSMUST00000193029 1420 ntBASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Dancr-204ENSMUST00000132389 2347 ntBASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Gm15653-201ENSMUST00000119247 907 ntBASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Gm45098-201ENSMUST00000207179 657 ntBASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Gm10313-201ENSMUST00000095320 1002 ntBASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Mxra8os-201ENSMUST00000097740 687 ntBASIC21.44■■□□□ 1.02
ShprhQ7TPQ3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ShprhQ7TPQ3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ShprhQ7TPQ3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ShprhQ7TPQ3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ShprhQ7TPQ3 Gm45412-201ENSMUST00000210217 2275 ntBASIC21.43■■□□□ 1.02
ShprhQ7TPQ3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ShprhQ7TPQ3 Gm12859-201ENSMUST00000117834 427 ntBASIC21.43■■□□□ 1.02
ShprhQ7TPQ3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
ShprhQ7TPQ3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ShprhQ7TPQ3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
ShprhQ7TPQ3 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC21.43■■□□□ 1.02
ShprhQ7TPQ3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ShprhQ7TPQ3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ShprhQ7TPQ3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
ShprhQ7TPQ3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
ShprhQ7TPQ3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ShprhQ7TPQ3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC21.42■■□□□ 1.02
ShprhQ7TPQ3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms