Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sned1Q70E20 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Sned1Q70E20 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sned1Q70E20 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sned1Q70E20 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sned1Q70E20 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sned1Q70E20 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sned1Q70E20 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sned1Q70E20 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sned1Q70E20 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sned1Q70E20 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sned1Q70E20 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.31■□□□□ 0.52
Sned1Q70E20 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sned1Q70E20 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC18.31■□□□□ 0.52
Sned1Q70E20 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.31■□□□□ 0.52
Sned1Q70E20 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sned1Q70E20 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sned1Q70E20 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sned1Q70E20 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sned1Q70E20 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sned1Q70E20 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sned1Q70E20 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sned1Q70E20 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.3■□□□□ 0.52
Sned1Q70E20 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sned1Q70E20 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sned1Q70E20 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sned1Q70E20 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sned1Q70E20 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sned1Q70E20 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.3■□□□□ 0.52
Sned1Q70E20 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sned1Q70E20 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC18.3■□□□□ 0.52
Sned1Q70E20 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC18.3■□□□□ 0.52
Sned1Q70E20 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sned1Q70E20 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sned1Q70E20 Gm9002-201ENSMUST00000178437 499 ntBASIC18.3■□□□□ 0.52
Sned1Q70E20 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sned1Q70E20 Gm45331-201ENSMUST00000209868 554 ntBASIC18.3■□□□□ 0.52
Sned1Q70E20 Gm45453-201ENSMUST00000211758 853 ntBASIC18.3■□□□□ 0.52
Sned1Q70E20 AC155286.1-201ENSMUST00000218632 448 ntBASIC18.3■□□□□ 0.52
Sned1Q70E20 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sned1Q70E20 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sned1Q70E20 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sned1Q70E20 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC18.3■□□□□ 0.52
Sned1Q70E20 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sned1Q70E20 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sned1Q70E20 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sned1Q70E20 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sned1Q70E20 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.29■□□□□ 0.52
Sned1Q70E20 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sned1Q70E20 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sned1Q70E20 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sned1Q70E20 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sned1Q70E20 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Sned1Q70E20 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sned1Q70E20 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sned1Q70E20 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC18.29■□□□□ 0.52
Sned1Q70E20 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.29■□□□□ 0.52
Sned1Q70E20 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
Sned1Q70E20 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sned1Q70E20 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sned1Q70E20 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Sned1Q70E20 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sned1Q70E20 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sned1Q70E20 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.29■□□□□ 0.52
Sned1Q70E20 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC18.29■□□□□ 0.52
Sned1Q70E20 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC18.28■□□□□ 0.52
Sned1Q70E20 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Sned1Q70E20 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC18.28■□□□□ 0.52
Sned1Q70E20 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sned1Q70E20 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sned1Q70E20 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sned1Q70E20 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sned1Q70E20 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sned1Q70E20 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sned1Q70E20 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.28■□□□□ 0.52
Sned1Q70E20 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sned1Q70E20 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sned1Q70E20 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Sned1Q70E20 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Sned1Q70E20 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC18.27■□□□□ 0.52
Sned1Q70E20 Mir6392-201ENSMUST00000184924 108 ntBASIC18.27■□□□□ 0.52
Sned1Q70E20 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sned1Q70E20 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC18.27■□□□□ 0.52
Sned1Q70E20 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Sned1Q70E20 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sned1Q70E20 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Sned1Q70E20 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Sned1Q70E20 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sned1Q70E20 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
Sned1Q70E20 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sned1Q70E20 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sned1Q70E20 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sned1Q70E20 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Sned1Q70E20 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sned1Q70E20 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sned1Q70E20 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Sned1Q70E20 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.27■□□□□ 0.51
Sned1Q70E20 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Sned1Q70E20 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.27■□□□□ 0.51
Sned1Q70E20 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms