Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.33■□□□□ 0.53
Npc1l1Q6T3U4 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.33■□□□□ 0.53
Npc1l1Q6T3U4 Gm18246-201ENSMUST00000221023 728 ntBASIC18.33■□□□□ 0.53
Npc1l1Q6T3U4 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.33■□□□□ 0.53
Npc1l1Q6T3U4 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Npc1l1Q6T3U4 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Npc1l1Q6T3U4 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Npc1l1Q6T3U4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Npc1l1Q6T3U4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Npc1l1Q6T3U4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.33■□□□□ 0.52
Npc1l1Q6T3U4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Npc1l1Q6T3U4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Npc1l1Q6T3U4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Npc1l1Q6T3U4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Npc1l1Q6T3U4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Gm45612-201ENSMUST00000211320 160 ntBASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1l1Q6T3U4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Mir6956-201ENSMUST00000183598 62 ntBASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Gm27301-201ENSMUST00000184012 127 ntBASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1l1Q6T3U4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Npc1l1Q6T3U4 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npc1l1Q6T3U4 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.3■□□□□ 0.52
Npc1l1Q6T3U4 Mir1895-201ENSMUST00000122615 79 ntBASIC18.3■□□□□ 0.52
Npc1l1Q6T3U4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.3■□□□□ 0.52
Npc1l1Q6T3U4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.3■□□□□ 0.52
Npc1l1Q6T3U4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.3■□□□□ 0.52
Npc1l1Q6T3U4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npc1l1Q6T3U4 Thap2-203ENSMUST00000218989 527 ntBASIC18.3■□□□□ 0.52
Npc1l1Q6T3U4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npc1l1Q6T3U4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.3■□□□□ 0.52
Npc1l1Q6T3U4 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Npc1l1Q6T3U4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npc1l1Q6T3U4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npc1l1Q6T3U4 Asic1-205ENSMUST00000228185 1818 ntBASIC18.3■□□□□ 0.52
Npc1l1Q6T3U4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npc1l1Q6T3U4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npc1l1Q6T3U4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npc1l1Q6T3U4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npc1l1Q6T3U4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Npc1l1Q6T3U4 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Gm15427-201ENSMUST00000117288 531 ntBASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.29■□□□□ 0.52
Npc1l1Q6T3U4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms