Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abcf1Q6P542 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.21■□□□□ 0.35
Abcf1Q6P542 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Abcf1Q6P542 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Mir6404-201ENSMUST00000183699 94 ntBASIC17.2■□□□□ 0.34
Abcf1Q6P542 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Abcf1Q6P542 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abcf1Q6P542 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abcf1Q6P542 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Abcf1Q6P542 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Abcf1Q6P542 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abcf1Q6P542 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abcf1Q6P542 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abcf1Q6P542 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Abcf1Q6P542 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Abcf1Q6P542 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abcf1Q6P542 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Abcf1Q6P542 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.19■□□□□ 0.34
Abcf1Q6P542 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abcf1Q6P542 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Abcf1Q6P542 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abcf1Q6P542 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abcf1Q6P542 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abcf1Q6P542 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abcf1Q6P542 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abcf1Q6P542 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.19■□□□□ 0.34
Abcf1Q6P542 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abcf1Q6P542 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abcf1Q6P542 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.18■□□□□ 0.34
Abcf1Q6P542 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Rprl3-201ENSMUST00000157400 290 ntBASIC17.18■□□□□ 0.34
Abcf1Q6P542 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.18■□□□□ 0.34
Abcf1Q6P542 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.18■□□□□ 0.34
Abcf1Q6P542 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.18■□□□□ 0.34
Abcf1Q6P542 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abcf1Q6P542 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms