Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf6Q6NVF9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf6Q6NVF9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf6Q6NVF9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf6Q6NVF9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf6Q6NVF9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf6Q6NVF9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf6Q6NVF9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf6Q6NVF9 Gm8655-201ENSMUST00000221159 852 ntBASIC14.91□□□□□ -0.02
Cpsf6Q6NVF9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cpsf6Q6NVF9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf6Q6NVF9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cpsf6Q6NVF9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf6Q6NVF9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf6Q6NVF9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf6Q6NVF9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf6Q6NVF9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf6Q6NVF9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cpsf6Q6NVF9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 Gm8344-201ENSMUST00000119813 856 ntBASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 Ank2-226ENSMUST00000189368 339 ntBASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cpsf6Q6NVF9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf6Q6NVF9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf6Q6NVF9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Cpsf6Q6NVF9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf6Q6NVF9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf6Q6NVF9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Cpsf6Q6NVF9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf6Q6NVF9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf6Q6NVF9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf6Q6NVF9 Gm44487-201ENSMUST00000205145 325 ntBASIC14.89□□□□□ -0.03
Cpsf6Q6NVF9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf6Q6NVF9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf6Q6NVF9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf6Q6NVF9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf6Q6NVF9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf6Q6NVF9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.89□□□□□ -0.03
Cpsf6Q6NVF9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf6Q6NVF9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpsf6Q6NVF9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Gm8097-201ENSMUST00000117903 829 ntBASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Gm21362-201ENSMUST00000194272 928 ntBASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf6Q6NVF9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms