Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
AtmQ62388 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.35□□□□□ -0.11
AtmQ62388 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Gm10499-201ENSMUST00000174094 934 ntBASIC14.35□□□□□ -0.11
AtmQ62388 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.35□□□□□ -0.11
AtmQ62388 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtmQ62388 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.34□□□□□ -0.11
AtmQ62388 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AtmQ62388 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
AtmQ62388 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AtmQ62388 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AtmQ62388 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AtmQ62388 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
AtmQ62388 Gm8318-201ENSMUST00000182954 872 ntBASIC14.34□□□□□ -0.11
AtmQ62388 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.34□□□□□ -0.11
AtmQ62388 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.34□□□□□ -0.11
AtmQ62388 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.34□□□□□ -0.11
AtmQ62388 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AtmQ62388 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AtmQ62388 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
AtmQ62388 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AtmQ62388 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AtmQ62388 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AtmQ62388 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
AtmQ62388 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.34□□□□□ -0.11
AtmQ62388 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.34□□□□□ -0.11
AtmQ62388 Mir1982-201ENSMUST00000157368 74 ntBASIC14.34□□□□□ -0.11
AtmQ62388 Gm27920-201ENSMUST00000183953 96 ntBASIC14.34□□□□□ -0.11
AtmQ62388 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.34□□□□□ -0.11
AtmQ62388 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.34□□□□□ -0.11
AtmQ62388 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AtmQ62388 Gm43179-201ENSMUST00000198797 275 ntBASIC14.34□□□□□ -0.11
AtmQ62388 Gm45841-201ENSMUST00000207700 164 ntBASIC14.34□□□□□ -0.11
AtmQ62388 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AtmQ62388 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.34□□□□□ -0.11
AtmQ62388 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AtmQ62388 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AtmQ62388 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AtmQ62388 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AtmQ62388 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
AtmQ62388 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AtmQ62388 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
AtmQ62388 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
AtmQ62388 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.33□□□□□ -0.11
AtmQ62388 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
AtmQ62388 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
AtmQ62388 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
AtmQ62388 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
AtmQ62388 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AtmQ62388 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AtmQ62388 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AtmQ62388 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AtmQ62388 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AtmQ62388 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AtmQ62388 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AtmQ62388 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
AtmQ62388 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AtmQ62388 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.33□□□□□ -0.12
AtmQ62388 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
AtmQ62388 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.33□□□□□ -0.12
AtmQ62388 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AtmQ62388 Gm44344-201ENSMUST00000200287 129 ntBASIC14.33□□□□□ -0.12
AtmQ62388 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.33□□□□□ -0.12
AtmQ62388 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.33□□□□□ -0.12
AtmQ62388 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AtmQ62388 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
AtmQ62388 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
AtmQ62388 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AtmQ62388 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AtmQ62388 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
AtmQ62388 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
AtmQ62388 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AtmQ62388 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AtmQ62388 Gm21854-201ENSMUST00000179901 471 ntBASIC14.33□□□□□ -0.12
AtmQ62388 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AtmQ62388 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AtmQ62388 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AtmQ62388 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
AtmQ62388 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.32□□□□□ -0.12
AtmQ62388 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
AtmQ62388 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
AtmQ62388 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AtmQ62388 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AtmQ62388 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
AtmQ62388 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
AtmQ62388 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AtmQ62388 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AtmQ62388 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms