Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.03■□□□□ 0.64
Irf9Q61179 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.03■□□□□ 0.64
Irf9Q61179 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Irf9Q61179 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf9Q61179 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf9Q61179 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC19.02■□□□□ 0.64
Irf9Q61179 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf9Q61179 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Irf9Q61179 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf9Q61179 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.02■□□□□ 0.64
Irf9Q61179 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.02■□□□□ 0.64
Irf9Q61179 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf9Q61179 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf9Q61179 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC19.02■□□□□ 0.64
Irf9Q61179 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC19.02■□□□□ 0.64
Irf9Q61179 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Irf9Q61179 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC19.02■□□□□ 0.64
Irf9Q61179 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC19.02■□□□□ 0.64
Irf9Q61179 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.02■□□□□ 0.64
Irf9Q61179 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf9Q61179 Gpr146-202ENSMUST00000053120 1040 ntBASIC19.02■□□□□ 0.64
Irf9Q61179 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC19.02■□□□□ 0.64
Irf9Q61179 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC19.02■□□□□ 0.63
Irf9Q61179 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Irf9Q61179 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Irf9Q61179 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.02■□□□□ 0.63
Irf9Q61179 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf9Q61179 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf9Q61179 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.01■□□□□ 0.63
Irf9Q61179 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf9Q61179 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf9Q61179 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf9Q61179 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf9Q61179 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Irf9Q61179 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Irf9Q61179 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf9Q61179 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Irf9Q61179 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf9Q61179 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf9Q61179 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Irf9Q61179 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf9Q61179 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.01■□□□□ 0.63
Irf9Q61179 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf9Q61179 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf9Q61179 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf9Q61179 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf9Q61179 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Irf9Q61179 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf9Q61179 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Irf9Q61179 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf9Q61179 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Irf9Q61179 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.01■□□□□ 0.63
Irf9Q61179 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Irf9Q61179 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Irf9Q61179 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Irf9Q61179 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Irf9Q61179 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Irf9Q61179 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC19■□□□□ 0.63
Irf9Q61179 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Irf9Q61179 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC19■□□□□ 0.63
Irf9Q61179 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19■□□□□ 0.63
Irf9Q61179 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC19■□□□□ 0.63
Irf9Q61179 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Irf9Q61179 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Irf9Q61179 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Irf9Q61179 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Irf9Q61179 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Irf9Q61179 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Irf9Q61179 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Irf9Q61179 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Irf9Q61179 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Irf9Q61179 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.99■□□□□ 0.63
Irf9Q61179 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Irf9Q61179 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Irf9Q61179 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Irf9Q61179 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Irf9Q61179 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Irf9Q61179 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.99■□□□□ 0.63
Irf9Q61179 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Irf9Q61179 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.99■□□□□ 0.63
Irf9Q61179 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Irf9Q61179 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Irf9Q61179 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Irf9Q61179 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Irf9Q61179 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Irf9Q61179 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Irf9Q61179 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Irf9Q61179 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Irf9Q61179 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.99■□□□□ 0.63
Irf9Q61179 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Irf9Q61179 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Irf9Q61179 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Irf9Q61179 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Irf9Q61179 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Irf9Q61179 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Irf9Q61179 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Irf9Q61179 Gm14701-201ENSMUST00000117156 348 ntBASIC18.98■□□□□ 0.63
Irf9Q61179 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.98■□□□□ 0.63
Irf9Q61179 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.98■□□□□ 0.63
Irf9Q61179 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms