Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd3Q61060 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd3Q61060 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd3Q61060 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Foxd3Q61060 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.09□□□□□ -0.15
Foxd3Q61060 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.09□□□□□ -0.15
Foxd3Q61060 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.09□□□□□ -0.15
Foxd3Q61060 Gm27525-201ENSMUST00000184465 107 ntBASIC14.09□□□□□ -0.15
Foxd3Q61060 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Foxd3Q61060 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Foxd3Q61060 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Foxd3Q61060 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.09□□□□□ -0.15
Foxd3Q61060 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.09□□□□□ -0.15
Foxd3Q61060 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Foxd3Q61060 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd3Q61060 BC037039-201ENSMUST00000192003 2205 ntBASIC14.09□□□□□ -0.15
Foxd3Q61060 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.08□□□□□ -0.15
Foxd3Q61060 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.08□□□□□ -0.15
Foxd3Q61060 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.08□□□□□ -0.15
Foxd3Q61060 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Foxd3Q61060 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.08□□□□□ -0.16
Foxd3Q61060 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Foxd3Q61060 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.08□□□□□ -0.16
Foxd3Q61060 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.08□□□□□ -0.16
Foxd3Q61060 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.08□□□□□ -0.16
Foxd3Q61060 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Foxd3Q61060 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.08□□□□□ -0.16
Foxd3Q61060 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Foxd3Q61060 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Foxd3Q61060 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Foxd3Q61060 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd3Q61060 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxd3Q61060 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Foxd3Q61060 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxd3Q61060 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Foxd3Q61060 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxd3Q61060 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxd3Q61060 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxd3Q61060 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Foxd3Q61060 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Foxd3Q61060 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxd3Q61060 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxd3Q61060 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxd3Q61060 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxd3Q61060 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.07□□□□□ -0.16
Foxd3Q61060 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.07□□□□□ -0.16
Foxd3Q61060 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxd3Q61060 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Foxd3Q61060 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxd3Q61060 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Foxd3Q61060 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Foxd3Q61060 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.07□□□□□ -0.16
Foxd3Q61060 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Foxd3Q61060 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms